CCR – Cancer Clinical Research Database logo

Cancer Clinical Research Database

Clinical Research Platform for Collecting, Integrating, and Accessing Customized Clinical Data

University of Utah Huntsman Cancer Institute CODE • Comprehensive Oncology Data & Engineering • Cancer Center Shared Resource

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CCR application screenshot showing patient overview with diagnoses, staging, and tumor data

The Cancer Clinical Research (CCR) database is a patient-centric clinical annotation system for clinical and population sciences investigators to capture clinically relevant phenotypic and genotypic data and integrate with other data sources. Integrations include the University of Utah Health Enterprise Data Warehouse (EDW), the HCI Tumor Registry, somatic testing results, and specimen tracking data.

CCR serves as a common repository for cancer-specific clinical and research data to support clinical and translational research. Much of the information in the repository assists in viewing the patient longitudinally, progressing from pre-disease history and screenings to diagnosis, treatment, and follow-up.

The repository is not a repetition of the existing medical record, but instead:

  • Provides additional complementary cancer specific information
  • Provides a cancer clinician-researcher viewpoint for data organization and presentation
  • Allows for collection of research parameters for approved research studies
  • Supports computation of custom derived variables
  • Allows for side-by-side comparison and mining of clinical and research data

Researchers can create and run reports through iQ (an ad-hoc query generation tool) in a variety of formats.


Key Capabilities

CONFIGURATION Supports configuring cancer-oriented data on-the-fly through the HCI Configure-on-Demand (COD) interface.

INTEGRATION CCR is integrated with multiple data sources to reduce manual chart abstraction, including the medical record, tumor registry, specimen data, and molecular testing results.

COLLABORATION All cancer groups share a common patient and can share securely medical event data with each other.

REPORTING Researchers can report on all collected and linked data through iQ, including custom medical events and attributes.

SECURITY CCR keeps research data secure and HIPAA compliant. As a patient- and disease-centric application, CCR gives cancer groups full control over their data.


CCR Features

CCR application screenshot showing lab test results and NLP data extraction for PSA values

Extracting discrete data values via NLP

CANCER GROUP-SPECIFIC DATA ACCESS — Principal investigators define cancer groups containing their cohorts of interest. They control access to all data and can decide to share data with other cancer groups.

SHARED PATIENT DATA — Supports shared access to electronic health record data for the cancer groups via nightly import of data from the EDW.

SEARCHING — Allows searching by patient, diagnosis, staging, tumor, medical event, study, and pathology report attributes. The iQ application provides extraction of integrated datasets including data from CCR, bio-specimen tracking, molecular data, and HCI tumor registry data.

BASIC DATA COLLECTION — Supported data elements include diagnosis, staging, tumor, study enrollments, vital status, tests/results, and specimens (through integration with CORE).

MEDICAL EVENT MODEL — Provides extensible user-defined data per cancer group, including patient, research studies, tumors, pathology, and medical events such as biopsies, surgeries, follow-ups, treatments, outcomes, complications, and more.

DATA EXTRACTED BY NATURAL LANGUAGE PROCESSING (NLP) — Integrates with customized data extraction from notes and reports (pathology, radiology, etc.) using the NLP application and home-grown software for integrating it with CCR.


Services Available

  • Training
  • Technical Support
  • Application Configuration
  • Application Development
  • Query and Report Generation
  • Natural Language Processing

CODE Open Office Hours

Held Virtually 1-2 pm every Thursday.
Must Join via the Teams application (not through a browser).
Click Join Teams Meeting

Contact Us

CODE Shared Resource
Director

Andrew Post, MD, PhD
Andrew.Post@hci.utah.edu
801-585-0600

CODE Shared Resource
Associate Director

Shirleen Hewitt, DBA, MBA, MS
Shirleen.Hewitt@hci.utah.edu
801-585-5972

Governance

HCI Senior Director Oversight
Aik Choon Tan, PhD

Shared Resource Advisory
Committee Chair

Howard Colman, MD, PhD

Shared Resource Advisory
Committee Members

Shannon Buckley, PhD
Nicola Camp, PhD
Christopher Fillmore, PhD
Anne Kirchhoff, PhD, MPH
Jessica Moehle, CCRP
Mark Oberg
Melanie Ward